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Scientist, Microfluidics

Flagshippioneeringinc

Pilsen, Czech Republic (Ampersand Biomedicines, Inc.) permanent

Posted: November 17, 2025

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Job Description

COMPANY DESCRIPTION

Ampersand Biomedicines is an innovative, privately held biotechnology company leading the way in developing multi-specific medicines that direct a wide range of therapeutic molecules to specific cells and biological contexts (www.Ampersand.bio). Ampersand was founded in Flagship Pioneering’s venture creation engine, where companies such as Moderna Therapeutics (NASDAQ: MRNA) and Seres Therapeutics (NASDAQ: MCRB) were conceived and created. With a strong emphasis on innovation, Ampersand cultivates a highly dynamic and entrepreneurial environment.

Ampersand Biomedicines’ Pilsen Team (Ampersand Pilsen CZ s.r.o), a Flagship Pioneering Company, discovers and optimizes human therapeutic antibodies with one of the industry’s most versatile technology platforms. Tailored to specific needs and desired Target Product Profiles, the experienced team leverages both cutting-edge (e.g., microfluidics, rabbit mass humanization) and state-of-the-art (e.g., phage display libraries) technologies to provide high quality leads against a range of diverse targets.

THE ROLE

Ampersand Pilsen CZ s.r.o. (Ampersand Biomedicines, Inc.) is looking for a highly motivated, goal-driven and collaborative scientist to join our dynamic Microfluidics team. This is a unique opportunity to help drive the development of a rapidly growing early-stage science and technology company within a well-resourced environment. The successful candidate will play a pivotal role in advancing our research and development efforts. The candidate will drive technology development and application in the Microfluidic department and will enjoy working in a pioneering and fast-paced start-up environment. This is a full-time on-site, laboratory-based position in Plzeň, Czech Republic.

KEY RESPONSIBILITIES

• Develop our unique microfluidic platform for various applications within antibody discovery projects.

• Active contribution to the technology platform development.

• Design and execute experiments using an advanced microfluidic platform to support research objectives.

• Operate droplet generation and sorting instruments with precision to ensure accurate data collection.

• Process primary cells and diverse cell lines for experimental workflows.

• Produce and perform quality control assessments of polymer chips used in droplet preparation and sorting.

• Collaborate effectively with the team members to achieve project milestones.

• Conduct and document experiments following detailed protocols and standard operating procedures; actively contribute to laboratory maintenance and equipment care to ensure a well-functioning workspace.

• Contribute to building a positive, team-oriented culture.

PROFESSIONAL EXPERIENCE & QUALIFICATIONS

• MSc or Ph.D. in mechanical engineering, electrical engineering, biomedical engineering, or related field.

• Hands on experience with microfluidic devices.

• Strong background in general engineering, device design and optimization.

• Experience in designing and building custom optical devices, previous work with lasers and/or with high-speed imaging, good knowledge of FPGA, piezo actuators, high-voltage microelectrodes, good knowledge of fluid dynamics and short-range electromagnetic fields is an asset.

• Proficiency in CAD software for (microfluidic) device design.

• Experience with programming environments for instrument operation (e.g., LabView).

• Hands-on experience with microfabrication techniques such as soft lithography, photolithography, and microfluidic chip bonding.

• Experience with microfluidic device integration with other technologies such as sensors, actuators, and electronics.

• Excellent problem-solving skills and ability to troubleshoot complex experimental setups, with attention to detail and good organizational skills.

• Sense of responsibility regarding experimental work, documentation, the team and the mission of Ampersand.

• Adaptivity to language requirements. Our team is international, written documents like experimental protocols and records are in English language.

• We recognize there is no perfect candidate. If you have some of the experience listed above but not all, please apply anyway. Experience comes in many forms, skills are transferable, and passion goes a long way. We are dedicated to building diverse and inclusive teams and look forward to learning more about your unique background.

Compensation and grade will be adjusted to the experience level of the applicant.

ABOUT FLAGSHIP PIONEERING:

Flagship Pioneering invents and builds platform companies, each with the potential for multiple products that transform human health, sustainability and beyond. Since its launch in 2000, Flagship has originated more than 100 companies. Many of these companies have addressed humanity’s most urgent challenges: vaccinating billions of people against COVID-19, curing intractable diseases, improving human health, preempting illness, and feeding the world by improving the resiliency and sustainability of agriculture.

Flagship has been recognized twice on FORTUNE’s “Change the World” list, an annual ranking of companies that have made a positive social and environmental impact through activities that are part of their core business strategies and has been twice named to Fast Company’s annual list of the World’s Most Innovative Companies. Learn more about Flagship at www.flagshippioneering.com.

At Flagship, we accept impossible missions to enable bigger leaps. Our core values guide us through uncertainty and toward lasting impact.

We are an equal opportunity employer. All qualified applicants will be considered for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, protected veteran status, or any other characteristic protected by law.

We recognize that great candidates often bring unique strengths without fulfilling every qualification. If you have some of the experience listed above but not all, please apply anyway. We are dedicated to building diverse and inclusive teams and look forward to learning more about your background and interest in Flagship.

Recruitment & Staffing Agencies: Flagship Pioneering and its affiliated Flagship Lab companies (collectively, “FSP”) do not accept unsolicited resumes from any source other than candidates. The submission of unsolicited resumes by recruitment or staffing agencies to FSP or its employees is strictly prohibited unless contacted directly by Flagship Pioneering’s internal Talent Acquisition team. Any resume submitted by an agency in the absence of a signed agreement will automatically become the property of FSP, and FSP will not owe any referral or other fees with respect thereto.

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